STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTUD6AOTU deubiquitinase 6A. (289 aa)    
Predicted Functional Partners:
EIF4G2
Eukaryotic translation initiation factor 4 gamma 2.
   
  0.814
EIF4E
Eukaryotic translation initiation factor 4E.
    
  0.783
PAIP1
poly(A) binding protein interacting protein 1.
   
  0.747
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
   
  0.747
OTUB2
OTU deubiquitinase, ubiquitin aldehyde binding 2.
    
 
 0.731
EIF4E1B
Eukaryotic translation initiation factor 4E family member 1B.
    
  0.710
VCPIP1
Valosin containing protein interacting protein 1.
      
 0.704
EIF4G3
Eukaryotic translation initiation factor 4 gamma 3.
   
  0.662
OTUB1
OTU deubiquitinase, ubiquitin aldehyde binding 1.
    
 
 0.645
OTUD3
OTU deubiquitinase 3.
      
0.633
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.