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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRIA1Glutamate ionotropic receptor AMPA type subunit 1. (906 aa)    
Predicted Functional Partners:
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
  
0.998
CNIH2
Cornichon family AMPA receptor auxiliary protein 2.
   
 0.997
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
  
0.996
CACNG2
Calcium voltage-gated channel auxiliary subunit gamma 2.
    
 0.996
CACNG8
Calcium voltage-gated channel auxiliary subunit gamma 8.
    
 0.992
CAMK2A
Calcium/calmodulin dependent protein kinase II alpha.
    
 0.979
DLG4
Discs large MAGUK scaffold protein 4.
   
 0.976
CAMK2D
Calcium/calmodulin dependent protein kinase II delta.
    
 0.970
CACNG3
Calcium voltage-gated channel auxiliary subunit gamma 3.
   
 0.965
DLG3
Discs large MAGUK scaffold protein 3.
    
 0.964
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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