STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgmBBeta-phosphoglucomutase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01990; match to protein family HMM TIGR02009. (222 aa)    
Predicted Functional Partners:
MCRO_0717
Trehalose/maltose hydrolase (family 65 glycosyl hydrolase); Identified by match to protein family HMM PF03632; match to protein family HMM PF03633; match to protein family HMM PF03636.
 
  
 0.987
MCRO_0718
Sucrase-isomaltase (oligo-1,6-glucosidase); Identified by match to protein family HMM PF00128.
  
  
 0.842
pulA
Pullulanase (alpha-dextrin endo-1,6-alpha-glucosidase); Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; Belongs to the glycosyl hydrolase 13 family.
     
 0.827
MCRO_0235
PTS system, glucose/glucosamine/beta-glucoside-specific, IICBA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM TIGR00830.
  
  
 0.661
MCRO_0577
PTS system, glucose-specific, IICBA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR00830.
  
  
 0.661
napA
Neutrophil activating factor NapA (bacterioferritin); Identified by match to protein family HMM PF00210; Belongs to the Dps family.
       0.523
lpdA
Dihydrolipoyl dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF00364; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350.
  
 
 0.491
pstA
Phosphate ABC transporter, permease PstA; Identified by match to protein family HMM PF00528.
  
  
 0.462
manB
Phosphomannomutase; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878.
  
 
 0.460
MCRO_0377
Putative aminotransferase; Identified by match to protein family HMM PF00266.
     
 0.421
Your Current Organism:
Mycoplasma crocodyli
NCBI taxonomy Id: 512564
Other names: M. crocodyli MP145, Mycoplasma crocodyli ATCC 51981, Mycoplasma crocodyli MP145, Mycoplasma crocodyli str. MP145, Mycoplasma crocodyli strain MP145
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