STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000005135annotation not available (136 aa)    
Predicted Functional Partners:
Vps25
Vacuolar protein-sorting-associated protein 25.
   
 0.901
Vps36
Vacuolar protein-sorting-associated protein 36 isoform X1.
    
 0.857
Chmp2a
Charged multivesicular body protein 2A.
   
 0.816
ENSCCNP00000024260
Charged multivesicular body protein 3.
    
 0.809
Vps4b
Vacuolar protein sorting-associated protein 4B.
    
 0.773
Vps4a
Vacuolar protein sorting-associated protein 4A isoform X1.
    
 0.773
ENSCCNP00000005282
annotation not available
    
 0.763
Snf8
ESCRT-II complex subunit VPS22.
    
 0.763
Fam91a1
Protein FAM91A1 isoform X1.
    
 
 0.729
Chmp7
Charged multivesicular body protein 7.
    
 0.679
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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