STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fsip1LOW QUALITY PROTEIN: fibrous sheath-interacting protein 1. (395 aa)    
Predicted Functional Partners:
Hsd17b10
3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methylbutyryl-CoA dehydrogenase.
      
 0.679
ENSCCNP00000029115
Probable G-protein coupled receptor 176.
 
      0.603
Dhrs11
17beta-estradiol 17-dehydrogenase / 3beta-hydroxysteroid 3-dehydrogenase.
   
  
 0.569
Trmt10c
Mitochondrial ribonuclease P protein 1.
      
 0.470
Slc6a7
Solute carrier family 6 (neurotransmitter transporter, L-proline) member 7.
   
  
 0.451
Akap4
A-kinase anchor protein 4.
    
 
 0.409
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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