STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dnaaf3Dynein, axonemal assembly factor 3. (558 aa)    
Predicted Functional Partners:
Tnnt2
Troponin T, cardiac muscle.
   
 0.749
Tnnt1
Troponin T, slow skeletal muscle isoform X1.
   
 0.749
Tnnt3
Troponin T3, skeletal, fast.
   
 0.749
Pddc1
Parkinson disease 7 domain-containing protein 1 isoform X1.
   
 0.737
Smim20
Small integral membrane protein 20.
   
 0.737
Dnali1
LOW QUALITY PROTEIN: axonemal dynein light intermediate polypeptide 1.
      
 0.667
Zmynd10
Zinc finger MYND domain-containing protein 10 isoform X1.
      
 0.662
Dyx1c1
LOW QUALITY PROTEIN: dyslexia susceptibility 1 candidate gene 1 protein.
      
 0.651
Dnaic2
Dynein intermediate chain 2, axonemal.
      
 0.650
Spag1
Sperm-associated antigen 1.
      
 0.612
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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