STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrrn1Leucine-rich repeat neuronal protein 1. (716 aa)    
Predicted Functional Partners:
Adgrl1
Adhesion G protein-coupled receptor L1.
    
 
 0.728
Adgrl2
Adhesion G protein-coupled receptor L2 isoform X1.
    
 
 0.717
ENSCCNP00000013232
Adhesion G protein-coupled receptor L3-like.
    
 
 0.712
Adgrl3
Adhesion G protein-coupled receptor L3.
    
 
 0.712
Lrrc8a
LOW QUALITY PROTEIN: volume-regulated anion channel subunit LRRC8A.
  
     0.410
Gal3st4
Galactose-3-O-sulfotransferase 4.
      
 0.406
Lrrc1
Leucine-rich repeat-containing protein 1.
  
   
 0.401
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.