STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pabpc4Polyadenylate-binding protein 4 isoform X1. (660 aa)    
Predicted Functional Partners:
Paip1
Polyadenylate-binding protein-interacting protein 1 isoform X1.
   
 0.973
Pan3
PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1.
    
 0.766
Eif4g1
Eukaryotic translation initiation factor 4 gamma 1 isoform X1.
   
 0.765
Pan2
LOW QUALITY PROTEIN: PAB-dependent poly(A)-specific ribonuclease subunit PAN2.
    
 0.758
Ncbp2
Nuclear cap-binding protein subunit 2.
   
 0.756
Eif4e
Eukaryotic translation initiation factor 4E.
   
 0.730
Eif4e1b
Eukaryotic translation initiation factor 4E family member 1B.
   
 0.716
Ncbp1
Nuclear cap-binding protein subunit 1.
   
 0.710
Upf1
Regulator of nonsense transcripts 1 isoform X1.
   
 0.709
Gspt2
Eukaryotic peptide chain release factor GTP-binding subunit ERF3B.
   
 0.692
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.