STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Adamts7A disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7. (1427 aa)    
Predicted Functional Partners:
ENSCCNP00000011621
annotation not available
 
  
 
 0.915
Col3a1
Collagen alpha-1(III) chain.
   
 0.635
Ntn5
Netrin 5.
   
  
 0.620
Ino80d
INO80 complex subunit D.
      
 0.608
ENSCCNP00000010580
annotation not available
      
 0.608
Col4a2
Collagen alpha-2(IV) chain.
   
 0.607
Ttr
Transthyretin.
      
 0.599
Tmem216
Transmembrane protein 216.
      
 0.597
Ceacam16
Carcinoembryonic antigen-related cell adhesion molecule 16.
   
 
 0.596
Atrn
Attractin isoform X1.
   
  
 0.594
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.