STRINGSTRING
mig-11 protein (Neurospora crassa) - STRING interaction network
"mig-11" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mig-11Predicted protein (315 aa)    
Predicted Functional Partners:
EFNCRP00000000556
2-methylcitrate dehydratase (565 aa)
 
 
  0.771
29E8.300
Probable 3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate (779 aa)
   
 
  0.679
EFNCRP00000006852
Probable ATP-citrate synthase subunit 1 (670 aa)
   
   
  0.563
B11A5.190
Putative uncharacterized protein (809 aa)
   
 
  0.562
B20J13.280
Predicted protein (217 aa)
   
 
  0.553
lys-6
Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis (784 aa)
       
  0.543
tca-3
Putative uncharacterized protein (784 aa)
       
  0.543
EFNCRP00000008287
Acetolactate synthase (689 aa)
   
 
  0.522
EFNCRP00000004636
Putative uncharacterized protein (608 aa)
       
  0.491
erg-1
C-8 sterol isomerase (256 aa)
 
            0.467
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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