STRINGSTRING
EFNCRP00000000043 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000000043" - Mitochondrial nuclease in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000000043Mitochondrial nuclease (332 aa)    
Predicted Functional Partners:
cel-1
Fatty acid synthase alpha subunit reductase (1864 aa)
     
 
  0.973
EFNCRP00000002269
Putative uncharacterized protein (347 aa)
     
      0.753
EFNCRP00000000269
Predicted protein (1031 aa)
     
      0.752
EFNCRP00000003056
DNA-repair protein rad2; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts a [...] (396 aa)
     
 
  0.735
EFNCRP00000005725
Putative uncharacterized protein (613 aa)
     
 
  0.668
EFNCRP00000006958
Putative uncharacterized protein (458 aa)
     
 
  0.629
EFNCRP00000006397
Predicted protein (745 aa)
       
 
  0.607
uvs-3
Predicted protein (969 aa)
     
   
  0.452
B23L4.030
Putative uncharacterized protein (840 aa)
     
   
  0.440
act
Actin (375 aa)
     
   
  0.425
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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