STRINGSTRING
cdh-1 protein (Neurospora crassa) - STRING interaction network
"cdh-1" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdh-1Putative uncharacterized protein (829 aa)    
Predicted Functional Partners:
gh61-5
Predicted protein (342 aa)
     
   
  0.862
B2E7.100
Putative uncharacterized protein (855 aa)
     
        0.673
EFNCRP00000006962
Predicted protein (390 aa)
     
 
    0.661
90C4.290
Endoglucanase 3 (390 aa)
     
   
  0.647
gh7-2
Endoglucanase EG-1 (442 aa)
     
   
  0.614
EFNCRP00000009357
Putative uncharacterized protein (488 aa)
   
 
  0.609
EFNCRP00000007443
Putative uncharacterized protein (603 aa)
   
 
  0.609
EFNCRP00000006956
Putative uncharacterized protein (496 aa)
   
 
  0.609
EFNCRP00000004185
Putative uncharacterized protein (467 aa)
   
 
  0.609
49D12.110
Putative uncharacterized protein (533 aa)
   
 
  0.609
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
Server load: low (18%) [HD]