STRINGSTRING
aab-1 protein (Neurospora crassa) - STRING interaction network
"aab-1" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aab-1Putative uncharacterized protein (271 aa)    
Predicted Functional Partners:
EFNCRP00000009068
Putative uncharacterized protein (174 aa)
     
  0.989
B18P24.040
Putative uncharacterized protein (314 aa)
     
  0.976
EFNCRP00000002908
Predicted protein (397 aa)
     
  0.953
hH3
Histone H3 (136 aa)
     
  0.760
cen-T
Predicted protein (550 aa)
     
  0.757
hH3v
Histone H3-like centromeric protein cse-4 (155 aa)
     
  0.749
hH4-1
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
     
  0.741
EFNCRP00000000141
Histone H4 (103 aa)
     
  0.735
B24H17.040
Glutamate synthase (2116 aa)
     
   
  0.722
EFNCRP00000002870
Putative uncharacterized protein (362 aa)
     
  0.610
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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