STRINGSTRING
mip-1 protein (Neurospora crassa) - STRING interaction network
"mip-1" - DNA polymerase gamma, mitochondrial in Neurospora crassa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mip-1DNA polymerase gamma, mitochondrial (1456 aa)    
Predicted Functional Partners:
EFNCRP00000000392
Glycyl-tRNA synthetase 1 (663 aa)
     
 
  0.933
EFNCRP00000009147
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (228 aa)
       
 
  0.688
aro-1
Pentafunctional AROM polypeptide; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis (1563 aa)
         
  0.654
mus-40
Putative uncharacterized protein (1269 aa)
   
  0.653
EFNCRP00000005330
Putative uncharacterized protein (758 aa)
   
  0.653
EFNCRP00000003056
DNA-repair protein rad2; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts a [...] (396 aa)
   
  0.653
EFNCRP00000002666
Predicted protein (713 aa)
   
  0.653
EFNCRP00000007297
Predicted protein (310 aa)
       
 
  0.636
sod-2
Superoxide dismutase [Mn], mitochondrial; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (225 aa)
       
 
  0.636
his-3
Histidine biosynthesis trifunctional protein (870 aa)
         
  0.582
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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