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ndi-1 protein (Neurospora crassa) - STRING interaction network
"ndi-1" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndi-1Putative uncharacterized protein (550 aa)    
Predicted Functional Partners:
B11O8.090
Predicted protein (256 aa)
     
   
  0.778
cyt-18
Tyrosyl-tRNA synthetase, mitochondrial (669 aa)
     
        0.715
cem-1
3-oxoacyl-[acyl-carrier-protein]-synthase (435 aa)
           
  0.695
cyc-1
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (108 aa)
     
   
  0.686
EFNCRP00000004162
Phosphoribosylformylglycinamidine synthase (1357 aa)
     
 
  0.657
EFNCRP00000002523
Probable YHM1 (Mitochondrial carrier) (304 aa)
     
      0.649
nde-2
Putative uncharacterized protein (577 aa)
   
     
0.633
cyt-26
Cytochrome c1, heme protein, mitochondrial (321 aa)
     
 
  0.632
EFNCRP00000002278
Elongation factor G, mitochondrial (800 aa)
     
        0.609
fes-1
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (231 aa)
     
 
  0.593
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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