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apg-1 protein (Neurospora crassa) - STRING interaction network
"apg-1" - Serine/threonine-protein kinase atg-1 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apg-1Serine/threonine-protein kinase atg-1 (932 aa)    
Predicted Functional Partners:
EFNCRP00000004490
Predicted protein (1028 aa)
     
  0.989
EFNCRP00000009736
Autophagy-related protein 11 (1300 aa)
     
  0.928
atg-8
Autophagy-related protein 8 (121 aa)
     
 
  0.912
EFNCRP00000005527
Phosphatidylinositol 3-kinase tor2 (2509 aa)
     
  0.879
EFNCRP00000004659
Autophagy-related protein 17 (568 aa)
     
  0.865
EFNCRP00000004162
Phosphoribosylformylglycinamidine synthase (1357 aa)
       
      0.851
EFNCRP00000005943
Putative uncharacterized protein (267 aa)
     
  0.830
EFNCRP00000000622
Putative uncharacterized protein (891 aa)
     
  0.821
EFNCRP00000003085
Probable cysteine protease atg-4 (506 aa)
     
 
  0.789
EFNCRP00000002941
Putative uncharacterized protein (454 aa)
     
  0.788
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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