STRINGSTRING
ota protein (Neurospora crassa) - STRING interaction network
"ota" - Ornithine aminotransferase in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
otaOrnithine aminotransferase (452 aa)    
Predicted Functional Partners:
aga-1
Arginase (325 aa)
 
  0.995
arg-6
Protein arg-6, mitochondrial (871 aa)
   
 
  0.991
EFNCRP00000002929
Delta-1-pyrroline-5-carboxylate dehydrogenase (601 aa)
 
  0.974
pro-4
Glutamate 5-kinase (468 aa)
     
  0.953
spe-1
Ornithine decarboxylase (484 aa)
       
  0.943
B1D1.070
Ornithine carbamoyltransferase, mitochondrial (359 aa)
 
 
  0.903
arg-4
Putative uncharacterized protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis- the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate (469 aa)
   
  0.814
pyr-3
Protein pyrABCN (1832 aa)
   
   
  0.784
arg-10
Argininosuccinate lyase (466 aa)
   
 
  0.776
arg-1
Argininosuccinate synthase (408 aa)
   
   
  0.763
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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