STRINGSTRING
vel protein (Neurospora crassa) - STRING interaction network
"vel" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
velPutative uncharacterized protein (833 aa)    
Predicted Functional Partners:
cdc42
Cell division control protein 42 (196 aa)
     
  0.994
EFNCRP00000006370
Putative uncharacterized protein (576 aa)
       
  0.976
bd
Protein ras-1 (213 aa)
       
  0.945
nrc-1
Putative uncharacterized protein (914 aa)
       
0.934
stk-4
Serine/threonine-protein kinase ste-20 (954 aa)
       
0.921
rho-4
Protein rho1 (268 aa)
     
  0.914
rho-1
GTP-binding protein RHO-1 protein (195 aa)
       
  0.907
rho-2
Putative uncharacterized protein (198 aa)
       
  0.907
rac
Cell division control protein 42 (197 aa)
       
  0.907
rho-3
Probable rho3 protein (207 aa)
       
  0.907
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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