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EFNCRP00000000327 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000000327" - Nuclear cap binding protein subunit 2 in Neurospora crassa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000000327Nuclear cap binding protein subunit 2 (145 aa)    
Predicted Functional Partners:
EFNCRP00000003775
Putative uncharacterized protein (829 aa)
     
  0.997
EFNCRP00000006167
ATP-dependent RNA helicase DHX8 (1179 aa)
     
  0.965
EFNCRP00000007171
Putative uncharacterized protein (247 aa)
     
  0.965
B23L4.030
Putative uncharacterized protein (840 aa)
     
  0.960
3H10.030
Importin alpha subunit (548 aa)
     
      0.899
EFNCRP00000007848
Predicted protein (415 aa)
     
  0.887
EFNCRP00000009135
Predicted protein (652 aa)
       
  0.881
12F11.220
Predicted protein; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5’ splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5’ splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5’ splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment complex formation by stabilizing the base pairing of the 5’ end of the U1 snRNA and the 5’ splice-site region (216 aa)
     
  0.876
EFNCRP00000006982
Predicted protein (313 aa)
       
  0.870
EFNCRP00000007063
Predicted protein (2573 aa)
       
  0.867
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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