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gdh-1 protein (Neurospora crassa) - STRING interaction network
"gdh-1" - NAD-specific glutamate dehydrogenase in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdh-1NAD-specific glutamate dehydrogenase (1050 aa)    
Predicted Functional Partners:
EFNCRP00000008151
Aspartate aminotransferase (482 aa)
     
  0.976
EFNCRP00000006856
Glutamate decarboxylase (521 aa)
     
 
  0.948
B24H17.040
Glutamate synthase (2116 aa)
       
  0.946
gln-1
Glutamine synthetase (362 aa)
         
  0.937
EFNCRP00000004855
Glutamine synthetase (360 aa)
         
  0.937
ala
Putative uncharacterized protein (486 aa)
     
 
  0.934
EFNCRP00000005443
Putative uncharacterized protein (545 aa)
     
 
  0.933
nit-6
Nitrite reductase [NAD(P)H] (1169 aa)
         
    0.928
B16L14.060
Putative uncharacterized protein (476 aa)
     
 
  0.922
EFNCRP00000002929
Delta-1-pyrroline-5-carboxylate dehydrogenase (601 aa)
     
 
  0.917
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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