STRINGSTRING
pif-1 protein (Neurospora crassa) - STRING interaction network
"pif-1" - Related to PIF1 protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pif-1Related to PIF1 protein; DNA-dependent ATPase and 5’-3’ DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability (931 aa)    
Predicted Functional Partners:
EFNCRP00000007616
Topoisomerase 1-associated factor 1 (1235 aa)
     
 
  0.924
B8J22.130
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
   
 
  0.804
EFNCRP00000004570
Putative uncharacterized protein (1695 aa)
     
 
  0.788
B2N18.190
Probable subunit of pre-replication complex (944 aa)
     
   
  0.762
mei-3
DNA repair protein RAD51 (353 aa)
     
 
  0.752
EFNCRP00000007530
DNA polymerase (1479 aa)
     
 
  0.749
mus-11
DNA repair and recombination protein mus-11 (600 aa)
       
 
  0.722
EFNCRP00000005114
Putative uncharacterized protein (874 aa)
     
 
  0.691
B10H4.020
DNA polymerase (1104 aa)
     
 
  0.670
EFNCRP00000003182
DNA primase (576 aa)
     
   
  0.647
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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