STRINGSTRING
ham-4 protein (Neurospora crassa) - STRING interaction network
"ham-4" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ham-4Predicted protein (761 aa)    
Predicted Functional Partners:
ham-3
Related to STRIATIN (854 aa)
     
 
  0.920
17E5.160
HAM-2, protein required for hyphal anastomosis (1103 aa)
     
 
  0.889
cr-1
Adenylate cyclase (2300 aa)
   
 
  0.754
B13B7.230
Related to transcription factor snf5p (732 aa)
     
   
  0.713
B16M17.090
Putative uncharacterized protein (829 aa)
     
 
  0.710
stk-6
Putative uncharacterized protein (808 aa)
     
 
  0.710
123A4.280
Predicted protein (745 aa)
     
        0.600
stk-20
Putative uncharacterized protein (602 aa)
     
 
  0.546
EFNCRP00000008805
Protein TEM1 (282 aa)
       
 
  0.542
tkl-1
Predicted protein (514 aa)
   
 
  0.538
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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