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ngf-1 protein (Neurospora crassa) - STRING interaction network
"ngf-1" - Histone acetyltransferase GCN5 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ngf-1Histone acetyltransferase GCN5 (422 aa)    
Predicted Functional Partners:
G21B4.020
Putative uncharacterized protein (505 aa)
     
  0.976
stk-18
Putative uncharacterized protein (3842 aa)
     
  0.973
EFNCRP00000003050
Putative uncharacterized protein (522 aa)
     
  0.973
5C2.130
Putative uncharacterized protein (320 aa)
     
  0.972
EFNCRP00000008584
Putative uncharacterized protein (245 aa)
       
  0.969
hH3
Histone H3 (136 aa)
       
  0.963
EFNCRP00000007320
Putative uncharacterized protein (747 aa)
     
  0.963
EFNCRP00000003862
Putative uncharacterized protein (751 aa)
     
  0.957
hat-6
Putative uncharacterized protein (1135 aa)
     
  0.956
EFNCRP00000003170
Predicted protein (836 aa)
     
  0.956
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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