STRINGSTRING
cry protein (Neurospora crassa) - STRING interaction network
"cry" - Putative cryptochrome DASH, mitochondrial in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cryPutative cryptochrome DASH, mitochondrial (722 aa)    
Predicted Functional Partners:
EFNCRP00000007616
Topoisomerase 1-associated factor 1 (1235 aa)
       
  0.775
ck-1a
Casein kinase I isoform delta (361 aa)
       
  0.686
phr
Deoxyribodipyrimidine photo-lyase (642 aa)
   
   
0.666
al-1
Phytoene dehydrogenase (595 aa)
 
   
  0.482
ung-1
Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (449 aa)
     
 
  0.404
EFNCRP00000001674
Putative uncharacterized protein (539 aa)
 
          0.403
B23G1.140
Putative uncharacterized protein (1951 aa)
           
  0.400
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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