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al-1 protein (Neurospora crassa) - STRING interaction network
"al-1" - Phytoene dehydrogenase in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
al-1Phytoene dehydrogenase (595 aa)    
Predicted Functional Partners:
EFNCRP00000000733
Phytoene synthase (552 aa)
   
 
  0.969
al-3
Geranylgeranyl pyrophosphate synthetase (433 aa)
         
  0.799
EFNCRP00000005373
Probable squalene synthetase (481 aa)
   
 
  0.697
wc-1
White collar 1 protein (1131 aa)
           
  0.652
EFNCRP00000009186
Putative uncharacterized protein (372 aa)
   
 
  0.604
wc-2
White collar 2 protein (532 aa)
           
  0.583
cao-2
Predicted protein (613 aa)
     
   
  0.544
qde-1
Predicted protein (1402 aa)
           
  0.518
qde-3
Putative uncharacterized protein (1955 aa)
           
  0.513
cry
Putative cryptochrome DASH, mitochondrial (722 aa)
 
   
  0.482
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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