STRINGSTRING
B13C5.190 protein (Neurospora crassa) - STRING interaction network
"B13C5.190" - Probable GTP-binding protein ypt5 in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B13C5.190Probable GTP-binding protein ypt5 (220 aa)    
Predicted Functional Partners:
EFNCRP00000007115
Putative uncharacterized protein (709 aa)
       
 
  0.937
EFNCRP00000006223
Rab5-like protein ypt51 (236 aa)
   
0.926
EFNCRP00000000622
Putative uncharacterized protein (891 aa)
       
  0.898
EFNCRP00000004945
Rab GDP-dissociation inhibitor (465 aa)
     
 
  0.885
EFNCRP00000002953
Putative uncharacterized protein (490 aa)
       
 
  0.839
EFNCRP00000007750
Putative uncharacterized protein (685 aa)
     
  0.779
EFNCRP00000005994
Vacuolar protein sorting-associated protein 45 (590 aa)
     
  0.772
scon-3
Negative regulator sulfur controller-3 (171 aa)
     
      0.757
pep4
Vacuolar protease A (396 aa)
     
 
  0.711
EFNCRP00000006767
Vacuolar protein sorting-associated protein VPS4 (441 aa)
     
 
  0.703
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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