STRINGSTRING
hom-1 protein (Neurospora crassa) - STRING interaction network
"hom-1" - Aspartate-semialdehyde dehydrogenase in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hom-1Aspartate-semialdehyde dehydrogenase (362 aa)    
Predicted Functional Partners:
94C8.140
Aspartokinase (522 aa)
 
 
  0.992
G17A4.300
Homoserine dehydrogenase (365 aa)
   
  0.988
aro-1
Pentafunctional AROM polypeptide; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis (1563 aa)
   
 
  0.928
B11B23.200
Probable threonine synthase (553 aa)
   
 
  0.874
aro-3
Chorismate synthase (432 aa)
   
   
  0.862
B1D1.060
Probable ACETOLACTATE SYNTHASE SMALL SUBUNIT (330 aa)
     
   
  0.795
trp-3
Tryptophan synthase (708 aa)
   
   
  0.782
B11A5.220
Homoserine kinase (358 aa)
   
   
  0.748
EFNCRP00000007806
Tryptophan synthase (708 aa)
   
   
  0.740
EFNCRP00000004781
Acetyl-CoA carboxylase (2275 aa)
         
  0.727
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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