STRINGSTRING
yif1 protein (Neurospora crassa) - STRING interaction network
"yif1" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yif1Putative uncharacterized protein (322 aa)    
Predicted Functional Partners:
EFNCRP00000005525
Putative uncharacterized protein (338 aa)
     
 
  0.784
EFNCRP00000006134
Putative uncharacterized protein (312 aa)
     
 
  0.662
7F4.310
Probable synaptobrevin SEC22 (217 aa)
     
   
  0.573
EFNCRP00000008965
Putative uncharacterized protein (110 aa)
     
        0.500
EFNCRP00000001258
Putative uncharacterized protein (281 aa)
     
 
  0.494
EFNCRP00000000611
Putative uncharacterized protein (248 aa)
 
            0.492
ypt-1
GTP-binding protein ypt1 (203 aa)
     
 
  0.472
EFNCRP00000006163
GTP-binding protein SAS1 (205 aa)
     
 
  0.408
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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