STRINGSTRING
tcu-1 protein (Neurospora crassa) - STRING interaction network
"tcu-1" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tcu-1Putative uncharacterized protein (236 aa)    
Predicted Functional Partners:
EFNCRP00000000930
Putative uncharacterized protein (674 aa)
     
   
  0.923
EFNCRP00000004638
Predicted protein (608 aa)
     
   
  0.907
18F11.040
Predicted protein (90 aa)
     
        0.893
EFNCRP00000002262
Putative uncharacterized protein (220 aa)
     
        0.893
tcu-3
Putative uncharacterized protein (185 aa)
     
   
  0.884
EFNCRP00000002822
Putative uncharacterized protein (180 aa)
           
  0.750
EFNCRP00000003445
Calcineurin subunit B (177 aa)
           
  0.745
EFNCRP00000004740
Predicted protein (229 aa)
     
        0.727
sod-2
Superoxide dismutase [Mn], mitochondrial; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (225 aa)
     
   
  0.692
B9B11.090
Predicted protein (97 aa)
     
   
  0.688
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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