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cyt-20 protein (Neurospora crassa) - STRING interaction network
"cyt-20" - Valyl-tRNA synthetase, mitochondrial in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyt-20Valyl-tRNA synthetase, mitochondrial (1050 aa)    
Predicted Functional Partners:
crp-4
60S ribosomal protein L5 (301 aa)
     
 
  0.931
EFNCRP00000005963
60S ribosomal protein L25 (156 aa)
     
 
  0.925
EFNCRP00000002207
60S ribosomal protein L35 (125 aa)
     
 
  0.900
EFNCRP00000006898
60S ribosomal protein L3 (392 aa)
     
 
  0.874
B7A16.090
Predicted protein (352 aa)
     
 
  0.873
B14A21.170
60S ribosomal protein L1, mitochondrial (303 aa)
     
 
  0.873
B24N11.110
60S ribosomal protein L3, mitochondrial (384 aa)
     
 
  0.870
EFNCRP00000002064
60S ribosomal protein L11 (174 aa)
     
 
  0.870
EFNCRP00000000353
60S ribosomal protein L10a (217 aa)
     
 
  0.869
EFNCRP00000002183
60S ribosomal protein L2, mitochondrial (383 aa)
     
 
  0.869
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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