STRINGSTRING
upr-1 protein (Neurospora crassa) - STRING interaction network
"upr-1" - DNA polymerase in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
upr-1DNA polymerase (1926 aa)    
Predicted Functional Partners:
B8J22.130
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
     
  0.983
mus-42
Putative uncharacterized protein (1347 aa)
     
  0.983
mus-26
MUS26 (299 aa)
     
  0.980
93G11.080
Putative uncharacterized protein (525 aa)
     
  0.974
B11H24.020
Putative uncharacterized protein; May play an essential role at the early stage of chromosomal DNA replication by coupling the polymerase alpha/primase complex to the cellular replication machinery (645 aa)
     
  0.957
EFNCRP00000003182
DNA primase (576 aa)
     
  0.946
EFNCRP00000006207
DNA ligase (923 aa)
     
  0.942
mus-53
DNA ligase 4 (1046 aa)
     
  0.934
polh
Putative uncharacterized protein (672 aa)
     
  0.932
EFNCRP00000006848
Putative uncharacterized protein (1086 aa)
     
  0.926
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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