STRINGSTRING
chit-1 protein (Neurospora crassa) - STRING interaction network
"chit-1" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chit-1Predicted protein (1434 aa)    
Predicted Functional Partners:
gh18-8
Predicted protein (1528 aa)
           
  0.821
gh18-6
Putative uncharacterized protein (1484 aa)
           
  0.821
EFNCRP00000000754
Putative uncharacterized protein (251 aa)
     
        0.581
B8J24.040
Putative uncharacterized protein (934 aa)
     
        0.540
EFNCRP00000006774
Predicted protein (901 aa)
     
 
  0.531
EFNCRP00000002226
WD-repeat containing protein slp1 (603 aa)
     
      0.516
EFNCRP00000009119
Putative uncharacterized protein (624 aa)
     
   
  0.478
EFNCRP00000009481
Putative uncharacterized protein (476 aa)
     
        0.422
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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