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EFNCRP00000001173 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000001173" - Pre-mRNA-splicing factor slu-7 in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000001173Pre-mRNA-splicing factor slu-7 (416 aa)    
Predicted Functional Partners:
EFNCRP00000007041
Pre-mRNA-splicing factor cef-1 (779 aa)
     
  0.988
EFNCRP00000006167
ATP-dependent RNA helicase DHX8 (1179 aa)
     
  0.972
EFNCRP00000000058
Cell cycle control protein cwf14 (148 aa)
       
  0.932
EFNCRP00000006777
Putative uncharacterized protein (543 aa)
     
  0.918
EFNCRP00000002061
Pre-mRNA-splicing factor clf-1 (695 aa)
     
  0.905
EFNCRP00000007640
Putative uncharacterized protein (478 aa)
     
  0.894
B24N11.250
Putative uncharacterized protein (682 aa)
     
  0.887
EFNCRP00000002006
Pre-mRNA splicing factor ATP-dependent RNA helicase prp16 (1005 aa)
     
  0.886
EFNCRP00000001852
Pre-mRNA splicing factor ATP-dependent RNA helicase PRP43 (845 aa)
     
  0.884
B10H4.100
Pre-mRNA splicing factor cwc2 (415 aa)
     
  0.875
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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