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gh10-1 protein (Neurospora crassa) - STRING interaction network
"gh10-1" - Endo-1,4-beta-xylanase in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gh10-1Endo-1,4-beta-xylanase (329 aa)    
Predicted Functional Partners:
gh61-5
Predicted protein (342 aa)
     
   
  0.847
B8G12.010
Endo-1,4-beta-xylanase (254 aa)
 
 
   
  0.776
EFNCRP00000004770
Putative uncharacterized protein (290 aa)
     
        0.661
90C4.290
Endoglucanase 3 (390 aa)
     
 
  0.658
B10D6.120
Endo-1,4-beta-xylanase (220 aa)
 
 
   
  0.614
gh3-4
Putative uncharacterized protein (735 aa)
   
 
  0.608
gh61-1
Putative uncharacterized protein (322 aa)
     
   
  0.608
B2E7.100
Putative uncharacterized protein (855 aa)
     
        0.605
EFNCRP00000001017
Xylosidase/arabinosidase (328 aa)
 
   
  0.599
aguA
Alpha-glucuronidase; Alpha-glucuronidase involved in the hydrolysis of xylan, a major structural heterogeneous polysaccharide found in plant biomass representing the second most abundant polysaccharide in the biosphere, after cellulose. Releases 4-O-methylglucuronic acid from xylan (836 aa)
 
     
  0.597
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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