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prm-3 protein (Neurospora crassa) - STRING interaction network
"prm-3" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prm-3Putative uncharacterized protein (587 aa)    
Predicted Functional Partners:
EFNCRP00000003455
rRNA 2’-O-methyltransferase fibrillarin (323 aa)
     
 
  0.949
EFNCRP00000009471
Putative uncharacterized protein (679 aa)
     
        0.836
EFNCRP00000007825
Predicted protein (429 aa)
     
        0.831
EFNCRP00000008141
Putative uncharacterized protein (556 aa)
     
        0.820
EFNCRP00000005384
40S ribosomal protein S2 (265 aa)
     
 
  0.794
EFNCRP00000005096
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (660 aa)
     
        0.793
hH4-1
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
       
  0.788
EFNCRP00000000141
Histone H4 (103 aa)
       
  0.788
ytm-1
Ribosome biogenesis protein ytm-1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (487 aa)
     
        0.751
EFNCRP00000002476
Putative uncharacterized protein (623 aa)
     
        0.732
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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