STRINGSTRING
rpn-4 protein (Neurospora crassa) - STRING interaction network
"rpn-4" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpn-4Predicted protein (714 aa)    
Predicted Functional Partners:
EFNCRP00000003534
Putative uncharacterized protein (1673 aa)
       
      0.633
3H10.010
Putative uncharacterized protein (622 aa)
       
 
  0.485
PKAC-1
cAMP dependent protein kinase A catalytic subunit (536 aa)
     
      0.435
EFNCRP00000000855
Serine/threonine-protein kinase PRKX (394 aa)
     
      0.434
EFNCRP00000009749
Putative uncharacterized protein (1933 aa)
       
 
  0.418
EFNCRP00000005264
Related to brefeldin A resistance protein (561 aa)
     
        0.408
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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