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EFNCRP00000001742 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000001742" - 5'-3' exoribonuclease 2 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP000000017425’-3’ exoribonuclease 2 (1072 aa)    
Predicted Functional Partners:
EFNCRP00000003830
Protein rai-1 (330 aa)
     
 
  0.976
EFNCRP00000006348
Putative uncharacterized protein (827 aa)
       
  0.900
EFNCRP00000007502
Putative uncharacterized protein (907 aa)
       
  0.882
EFNCRP00000006679
Putative uncharacterized protein; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1415 aa)
       
0.872
94C8.120
Predicted protein (392 aa)
     
 
  0.843
EFNCRP00000002872
Mitotic control protein dis3 (1013 aa)
     
  0.832
EFNCRP00000002638
Nucleolar protein 58 (597 aa)
     
  0.813
frh
ATP-dependent RNA helicase DOB1 (1106 aa)
     
 
  0.808
gul-1
Putative uncharacterized protein (1358 aa)
     
  0.799
EFNCRP00000003455
rRNA 2’-O-methyltransferase fibrillarin (323 aa)
     
  0.799
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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