STRINGSTRING
B2O8.040 protein (Neurospora crassa) - STRING interaction network
"B2O8.040" - DNA repair helicase RAD3 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2O8.040DNA repair helicase RAD3 (796 aa)    
Predicted Functional Partners:
EFNCRP00000001975
Predicted protein (362 aa)
     
  0.989
EFNCRP00000006580
Putative RNA polymerase II transcription factor B subunit 1 (663 aa)
     
  0.986
EFNCRP00000005533
Putative uncharacterized protein (475 aa)
     
  0.985
B14A6.220
Putative uncharacterized protein (427 aa)
     
  0.984
EFNCRP00000006202
DNA repair helicase RAD25 (862 aa)
     
  0.976
EFNCRP00000001878
Related to transcription factor TFIIH chain p47 (416 aa)
     
  0.973
B2F7.040
Probable cyclin-dependent ser/thr protein kinase KIN28 (407 aa)
     
  0.970
B2O8.310
Related to basic transcription factor 2 (35 kd SU) (439 aa)
     
  0.969
12F11.030
Predicted protein (353 aa)
     
  0.969
EFNCRP00000007105
Putative uncharacterized protein (348 aa)
     
  0.966
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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