STRINGSTRING
EFNCRP00000001878 protein (Neurospora crassa) - STRING interaction network
"EFNCRP00000001878" - Related to transcription factor TFIIH chain p47 in Neurospora crassa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFNCRP00000001878Related to transcription factor TFIIH chain p47 (416 aa)    
Predicted Functional Partners:
EFNCRP00000005533
Putative uncharacterized protein (475 aa)
     
  0.991
B2O8.040
DNA repair helicase RAD3 (796 aa)
     
  0.973
B2O8.310
Related to basic transcription factor 2 (35 kd SU) (439 aa)
     
  0.972
EFNCRP00000006580
Putative RNA polymerase II transcription factor B subunit 1 (663 aa)
     
  0.972
12F11.030
Predicted protein (353 aa)
     
    0.954
EFNCRP00000006202
DNA repair helicase RAD25 (862 aa)
     
  0.952
EFNCRP00000001975
Predicted protein (362 aa)
     
  0.948
EFNCRP00000003660
Related to transcription initiation factor IIE, beta subunit (302 aa)
     
  0.938
B2F7.040
Probable cyclin-dependent ser/thr protein kinase KIN28 (407 aa)
     
  0.882
EFNCRP00000009337
ATP-dependent RNA helicase chl-1 (1073 aa)
     
  0.864
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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