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pef-1 protein (Neurospora crassa) - STRING interaction network
"pef-1" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pef-1Putative uncharacterized protein (311 aa)    
Predicted Functional Partners:
erg-1
C-8 sterol isomerase (256 aa)
           
  0.742
EFNCRP00000008293
Vacuolar protein-sorting protein bro-1 (1012 aa)
       
 
  0.719
EFNCRP00000005796
pH-response regulator protein palA/rim-20 (886 aa)
       
 
  0.719
EFNCRP00000004286
Putative uncharacterized protein (1045 aa)
       
  0.719
EFNCRP00000002683
Putative uncharacterized protein (818 aa)
       
  0.719
EFNCRP00000000379
Putative uncharacterized protein (1007 aa)
       
  0.719
EFNCRP00000000354
Calpain-like protease palB/rim-13 (956 aa)
       
  0.719
EFNCRP00000006289
Myosin regulatory light chain cdc4 (152 aa)
           
  0.483
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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