STRINGSTRING
amyc protein (Neurospora crassa) - STRING interaction network
"amyc" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amycPutative uncharacterized protein (1263 aa)    
Predicted Functional Partners:
rho-1
GTP-binding protein RHO-1 protein (195 aa)
       
  0.967
cdc42
Cell division control protein 42 (196 aa)
       
  0.967
rho-2
Putative uncharacterized protein (198 aa)
       
  0.967
rho-4
Protein rho1 (268 aa)
       
  0.967
rac
Cell division control protein 42 (197 aa)
       
  0.967
rho-3
Probable rho3 protein (207 aa)
       
  0.967
9G6.170
Heat shock protein 80 (705 aa)
       
  0.954
B20D17.130
Putative uncharacterized protein (1442 aa)
     
  0.947
rgf3
Putative uncharacterized protein (1688 aa)
     
 
  0.919
rgf1
Putative uncharacterized protein (1233 aa)
     
 
  0.919
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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