STRINGSTRING
pex4 protein (Neurospora crassa) - STRING interaction network
"pex4" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pex4Putative uncharacterized protein (162 aa)    
Predicted Functional Partners:
EFNCRP00000004982
60S ribosomal protein L40 (141 aa)
       
  0.973
EFNCRP00000005588
Ubiquitin-conjugating enzyme E2 variant 1 (156 aa)
     
  0.962
EFNCRP00000009749
Putative uncharacterized protein (1933 aa)
     
  0.955
EFNCRP00000008460
E3 ubiquitin-protein ligase TOM1-like (4026 aa)
     
  0.952
EFNCRP00000005236
Ubiquitin-activating enzyme E1 (1038 aa)
       
  0.934
EFNCRP00000006345
Putative uncharacterized protein (1600 aa)
       
  0.919
ubi
Ubiquitin (305 aa)
     
  0.916
EFNCRP00000005531
Predicted protein (336 aa)
         
    0.900
pex12
Putative uncharacterized protein (446 aa)
       
 
  0.873
EFNCRP00000005167
Predicted protein (238 aa)
       
  0.871
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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