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hda-2 protein (Neurospora crassa) - STRING interaction network
"hda-2" - Histone deacetylase phd1 in Neurospora crassa
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hda-2Histone deacetylase phd1 (499 aa)    
Predicted Functional Partners:
cac-3
Histone acetyltransferase type B subunit 2 (446 aa)
     
  0.973
hH3
Histone H3 (136 aa)
     
  0.964
EFNCRP00000002092
Putative uncharacterized protein (1486 aa)
     
  0.959
29E8.260
Predicted protein (935 aa)
   
  0.952
hH2B
Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (137 aa)
       
  0.947
hH4-1
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
     
  0.942
B14D6.290
Putative uncharacterized protein (366 aa)
     
  0.941
hat-6
Putative uncharacterized protein (1135 aa)
     
  0.936
hat-4
Histone acetyltransferase esa-1 (506 aa)
     
  0.933
hda-1
Putative uncharacterized protein (738 aa)
   
 
0.932
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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