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cyt-18 protein (Neurospora crassa) - STRING interaction network
"cyt-18" - Tyrosyl-tRNA synthetase, mitochondrial in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyt-18Tyrosyl-tRNA synthetase, mitochondrial (669 aa)    
Predicted Functional Partners:
cyt19-1
CYT-19 DEAD-box protein (626 aa)
   
   
  0.957
EFNCRP00000008387
Predicted protein (468 aa)
   
   
  0.912
EFNCRP00000002278
Elongation factor G, mitochondrial (800 aa)
   
   
  0.884
EFNCRP00000007920
Tyrosyl-tRNA synthetase (404 aa)
     
  0.882
EFNCRP00000001639
GrpE protein homolog, mitochondrial; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (238 aa)
     
   
  0.876
EFNCRP00000005290
Probable proline-tRNA ligase (558 aa)
   
   
  0.858
EFNCRP00000009680
Predicted protein (631 aa)
   
   
  0.856
B7A16.090
Predicted protein (352 aa)
     
   
  0.852
tim23
Mitochondrial import inner membrane translocase subunit tim23 (238 aa)
     
        0.841
tim54
Mitochondrial import inner membrane translocase subunit tim-54 (468 aa)
     
        0.829
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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