STRINGSTRING
sec53 protein (Neurospora crassa) - STRING interaction network
"sec53" - Phosphomannomutase in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sec53Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions (273 aa)    
Predicted Functional Partners:
EFNCRP00000007282
Mannose-6-phosphate isomerase (459 aa)
     
 
  0.959
EFNCRP00000003098
Predicted protein (410 aa)
     
 
  0.959
EFNCRP00000001587
Putative uncharacterized protein (451 aa)
     
 
  0.933
emp-1
Hexokinase (489 aa)
       
  0.930
EFNCRP00000000914
Glucokinase (530 aa)
       
  0.930
B8I24.030
Related to hexokinase (565 aa)
       
  0.925
gfa1
Glucosamine-fructose-6-phosphate aminotransferase (690 aa)
 
   
  0.783
gpi-1
Glucose-6-phosphate isomerase (561 aa)
   
 
  0.652
EFNCRP00000008344
Putative uncharacterized protein (2357 aa)
         
  0.630
EFNCRP00000002170
Probable cell wall alpha-1, 3-glucan synthase (2393 aa)
         
  0.630
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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