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cot-5 protein (Neurospora crassa) - STRING interaction network
"cot-5" - Alpha-1,3-mannosyltransferase alg-2 in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cot-5Alpha-1,3-mannosyltransferase alg-2 (471 aa)    
Predicted Functional Partners:
EFNCRP00000007129
Putative uncharacterized protein (456 aa)
     
  0.965
EFNCRP00000006879
Alpha-1,2-mannosyltransferase alg-11 (556 aa)
     
  0.955
cot-3
Elongation factor 2 (844 aa)
           
  0.758
103E1.100
Imidazole glycerol phosphate synthase hisHF (553 aa)
   
 
  0.693
EFNCRP00000006090
Putative uncharacterized protein (439 aa)
   
 
  0.638
ran
GTP-binding nuclear protein GSP1/Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (215 aa)
           
  0.621
EFNCRP00000000799
Glycogen debranching enzyme (1561 aa)
   
  0.611
7F4.180
Glycogenin (686 aa)
     
  0.602
EFNCRP00000000258
Predicted protein (311 aa)
     
  0.602
ro-4
Actin-like protein (380 aa)
           
  0.594
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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