STRINGSTRING
B11B23.050 protein (Neurospora crassa) - STRING interaction network
"B11B23.050" - Putative uncharacterized protein in Neurospora crassa
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B11B23.050Putative uncharacterized protein (617 aa)    
Predicted Functional Partners:
EFNCRP00000001939
Putative uncharacterized protein (572 aa)
     
 
  0.754
EFNCRP00000006167
ATP-dependent RNA helicase DHX8 (1179 aa)
     
 
  0.586
B23L4.030
Putative uncharacterized protein (840 aa)
     
 
  0.533
B24N11.250
Putative uncharacterized protein (682 aa)
       
 
  0.461
EFNCRP00000002006
Pre-mRNA splicing factor ATP-dependent RNA helicase prp16 (1005 aa)
       
 
  0.461
EFNCRP00000001852
Pre-mRNA splicing factor ATP-dependent RNA helicase PRP43 (845 aa)
       
 
  0.461
EFNCRP00000001084
Putative uncharacterized protein (1294 aa)
     
 
  0.447
frh
ATP-dependent RNA helicase DOB1 (1106 aa)
     
 
  0.431
B17C10.130
Related to Ribonuclease III (352 aa)
     
   
  0.410
EFNCRP00000006679
Putative uncharacterized protein; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1415 aa)
     
 
  0.407
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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