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frh protein (Neurospora crassa) - STRING interaction network
"frh" - ATP-dependent RNA helicase DOB1 in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frhATP-dependent RNA helicase DOB1 (1106 aa)    
Predicted Functional Partners:
B11N2.160
Putative uncharacterized protein (922 aa)
     
    0.988
EFNCRP00000003069
Related to nucleolar 100K polymyositis-scleroderma protein (822 aa)
     
  0.984
EFNCRP00000000471
U3 small nucleolar RNA-associated protein 10 (1788 aa)
     
 
  0.982
EFNCRP00000009801
Putative uncharacterized protein (964 aa)
     
    0.981
EFNCRP00000001852
Pre-mRNA splicing factor ATP-dependent RNA helicase PRP43 (845 aa)
     
  0.980
99H12.110
Putative uncharacterized protein (1258 aa)
     
  0.978
EFNCRP00000005988
Putative uncharacterized protein (1774 aa)
     
  0.976
EFNCRP00000001002
Putative uncharacterized protein (879 aa)
     
 
    0.969
EFNCRP00000005107
Putative uncharacterized protein (1160 aa)
     
 
  0.968
EFNCRP00000007077
Putative uncharacterized protein (1057 aa)
     
    0.964
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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