STRINGSTRING
5C2.040 protein (Neurospora crassa) - STRING interaction network
"5C2.040" - Predicted protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
5C2.040Predicted protein (411 aa)    
Predicted Functional Partners:
pca-1
Proteasome subunit alpha type 6 (254 aa)
       
      0.590
pca-2
Probable proteasome subunit alpha type-2; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (274 aa)
       
      0.590
pca-4
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (269 aa)
       
      0.590
EFNCRP00000001169
Predicted protein (674 aa)
       
 
  0.435
12F11.030
Predicted protein (353 aa)
           
  0.418
EFNCRP00000003450
Probable methionyl-tRNA synthetase, mitochondrial (622 aa)
           
  0.412
EFNCRP00000000198
Predicted protein (333 aa)
     
   
  0.409
EFNCRP00000000889
Putative uncharacterized protein (1661 aa)
           
  0.407
EFNCRP00000004545
Probable ribosomal protein L7a.e.B, cytosolic (262 aa)
           
  0.402
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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