STRINGSTRING
ubr1 protein (Neurospora crassa) - STRING interaction network
"ubr1" - Putative uncharacterized protein in Neurospora crassa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubr1Putative uncharacterized protein (1992 aa)    
Predicted Functional Partners:
EFNCRP00000002104
Putative uncharacterized protein (440 aa)
     
  0.976
mus-8
Ubiquitin-conjugating enzyme E2 2 (151 aa)
     
  0.970
EFNCRP00000009749
Putative uncharacterized protein (1933 aa)
     
  0.918
EFNCRP00000004162
Phosphoribosylformylglycinamidine synthase (1357 aa)
       
      0.865
EFNCRP00000008460
E3 ubiquitin-protein ligase TOM1-like (4026 aa)
     
  0.819
EFNCRP00000004422
Putative uncharacterized protein (238 aa)
       
  0.771
EFNCRP00000003261
Ubiquitin carrier protein (147 aa)
       
  0.760
EFNCRP00000005100
Putative uncharacterized protein (204 aa)
       
  0.759
pex4
Putative uncharacterized protein (162 aa)
       
  0.759
EFNCRP00000001099
Ubiquitin carrier protein (151 aa)
       
  0.759
Your Current Organism:
Neurospora crassa
NCBI taxonomy Id: 5141
Other names: Chrysonilia crassa, N. crassa, Neurospora, Neurospora crassa
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